Ligand-Receptor interaction enrichment analysis — SpaCET.CCI.LRNetworkScore • SpaCET

Calculate the overall intensity of L-R interactions within ST spots.

Usage

SpaCET.CCI.LRNetworkScore(SpaCET_obj, coreNo = 6)

Arguments

SpaCET_obj: A SpaCET object.
coreNo: Core number in parallel computation.

Value

A SpaCET object.

Examples

SpaCET_obj <- SpaCET.CCI.LRNetworkScore(SpaCET_obj, coreNo=6)
SpaCET.visualize.spatialFeature(SpaCET_obj, spatialType = "LRNetworkScore", spatialFeatures=c("Network_Score","Network_Score_pv"))