Ligand-Receptor analysis for a co-localized cell-type pair — SpaCET.CCI.cellTypePair • SpaCET

Test the co-expression of ligands and receptors within the same ST spot for the co-localized cell-type pairs.

Usage

SpaCET.CCI.cellTypePair(SpaCET_obj, cellTypePair)

Arguments

SpaCET_obj: An SpaCET object.
cellTypePair: A pair of cell-types.

Value

An SpaCET object.

Examples

SpaCET_obj <- SpaCET.CCI.cellTypePair(SpaCET_obj, cellTypePair=c("CAF","Macrophage M2"))