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Deconvolve tumor ST data set

Source: R/deconvolution.R
SpaCET.deconvolution.Rd

Estimate the cell fraction of cell lineages and sub lineages.

Usage

SpaCET.deconvolution(SpaCET_obj, cancerType, coreNo = 8)

Arguments

SpaCET_obj

An SpaCET object.

cancerType

Cancer type of the current tumor ST dataset.

coreNo

Core number in parallel computation.

Value

An SpaCET object.

Examples

SpaCET_obj <- SpaCET.deconvolution(SpaCET_obj, cancerType="BRCA", coreNo=8)