Create a SpaCET object from 10x Xenium

Read 10x Genomics Xenium output into a SpaCET object.

Usage

create.SpaCET.object.Xenium(xeniumPath, organism = "human")

Arguments

xeniumPath

Path to the Xenium output folder.

organism

Species, either "human" (default) or "mouse".

Value

A SpaCET object.

Examples

if (FALSE) { # \dontrun{
SpaCET_obj <- create.SpaCET.object.Xenium(xeniumPath = "/path/to/xenium_output")
} # }